Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
CESC rs73937187 chr2:76455293 C/T 9.44E-15 293 21.33 19.17 0.47 KM Plot
CESC rs74032529 chr15:99240059 T/C 5.01E-5 294 21.17 26.63 11.6 KM Plot
CESC rs74234036 chr11:33099481 T/A 0 297 22.93 19.53 0.5 KM Plot
CESC rs7426414 chr3:100285243 G/A 9.9E-6 292 21.85 19.95 12.05 KM Plot
CESC rs74860828 chr1:59087332 C/T 8.15E-8 294 21.23 25.63 11.13 KM Plot
CESC rs74889474 chr11:33061647 A/T 1.23E-6 293 21.85 24.9 1.7 KM Plot
CESC rs7518520 chr1:217480480 C/G 5.46E-5 294 21.33 23.3 11.83 KM Plot
CESC rs75447386 chr10:81739647 G/A 3.45E-9 297 25.17 16.42 2.62 KM Plot
CESC rs75532475 chr15:66832466 A/G 1.04E-6 291 21.57 20.77 10.92 KM Plot
CESC rs7566807 chr2:237290993 A/T 3.06E-5 299 21.2 27.63 9.28 KM Plot
CESC rs75896879 chr4:57934235 G/A 2.14E-8 296 21.2 30.18 11.6 KM Plot
CESC rs76005998 chr18:44186304 T/C 1.77E-14 289 21.33 20.53 1.53 KM Plot
CESC rs7610985 chr3:161062848 G/A 1.8E-5 293 25.37 19.68 19.73 KM Plot
CESC rs76154193 chr11:33064137 A/G 1.08E-6 292 22.4 23.22 1.7 KM Plot
CESC rs76239460 chr10:81723227 C/T 4.01E-9 297 25.17 16.42 2.62 KM Plot